Electron Microscopy Data Bank

EMD-37104

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96-nm axonemal repeat with RS1/2/3

Release date: April 10, 2024
Resolution: 24.2 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37111

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48-nm repeat DMT

Release date: April 10, 2024
Resolution: 19.6 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37114

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Radial Spoke 1 (RS1)

Release date: April 10, 2024
Resolution: 25.0 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37116

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RS1 refined with head mask

Release date: April 10, 2024
Resolution: 25.0 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37117

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Radial Spoke 2 (RS2)

Release date: April 10, 2024
Resolution: 24.2 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37118

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Radial Spoke 2 (RS2) head

Release date: April 10, 2024
Resolution: 23.8 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37119

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Radial Spoke 3

Release date: April 10, 2024
Resolution: 27.0 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37120

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Radial Spoke 3 head

Release date: April 10, 2024
Resolution: 28.9 Å
EM Method: Subtomogram averaging

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

The ependymal cilia (Cellular component from Mus musculus)

EMD-37949

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RS head-neck monomer

Release date: Feb. 7, 2024
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 8wzb
Q-score: 0.395

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

Dnaj homolog subfamily b member 13 (40 kDa, Protein from Mus musculus)
Radial spoke head-neck monomer complex of mouse (Complex from Mus musculus)
Nucleoside diphosphate kinase homolog 5 (25 kDa, Protein from Mus musculus)
Dpy30 domain containing 2 (18 kDa, Protein from Mus musculus)
Radial spoke head 1 homolog (35 kDa, Protein from Mus musculus)
Radial spoke head protein 4 homolog a (80 kDa, Protein from Mus musculus)
Radial spoke head protein 3 homolog b (45 kDa, Protein from Mus musculus)
Radial spoke head protein 9 homolog (31 kDa, Protein from Mus musculus)

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EMD-38003

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The consensus map of RS head-neck dimer

Release date: Feb. 7, 2024
Resolution: 3.57 Å
EM Method: Single-particle

Meng X, Xu C, Li J, Qiu B, Luo J, Hong Q, Tong Y, Fang C, Feng Y, Ma R, Shi X, Lin C, Pan C, Zhu X, Yan X, Cong Y

Nat Commun (2024) 15 pp. 362-362 [ Pubmed: 38191553 DOI: doi:10.1038/s41467-023-44577-1 ]

Sample:

Radial spoke head-neck dimer complex (Complex from Mus musculus)

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